in 2,022 ESCC cases and 2,039 controls
| SNP | Location | Region | Allele | MAF | P-value | OR(95% CI) | Functional class | Mapped gene(s) | Study |
|---|---|---|---|---|---|---|---|---|---|
| rs1789896 | 4:100256984 | 4q23 | G/A | 0.09 | 5.41E-06 | 1.39 (1.21-1.61) | downstream | ADH1C | Wu C, et al. (PMID: 21642993), 2011 |
MAF: minor allele frequency in controls
in ESCC tumor or normal tissues of 94 ESCC patients
| SNP | Location | Region | Allele | Effect size | P-value | FDR | Mapped gene(s) | Tissue | Action | Study |
|---|---|---|---|---|---|---|---|---|---|---|
| rs1789896 | 4:100256984 | 4q23 | G/A | 0.73 | 1.49E-04 | 2.69E-02 | ADH1A | Adjacent normal tissue | eQTL boxplot | Chang J, et al. (PMID: 28548104), 2017 |
