rs1789903

Genome Assembly: GRCh37.p13/hg19

External References:


Association with risk of ESCC

in 2,022 ESCC cases and 2,039 controls

SNPLocationRegionAlleleMAFP-valueOR(95% CI)Functional
class
Mapped
gene(s)
Study
rs1789903 4:100262041 4q23 C/G 0.09 4.40E-06 1.4 (1.21-1.62) intronic ADH1C Wu C, et al. (PMID: 21642993), 2011

MAF: minor allele frequency in controls

Association with gene expression

in ESCC tumor or normal tissues of 94 ESCC patients

SNPLocationRegionAlleleEffect sizeP-valueFDRMapped
gene(s)
TissueActionStudy
rs1789903 4:100262041 4q23 C/G -0.73 1.49E-04 2.69E-02 ADH1A Adjacent normal tissue eQTL boxplot Chang J, et al. (PMID: 28548104), 2017